Publications
Publications
| No | Title | Date | Journal |
|---|---|---|---|
| 1 | Tracing the Origin of the 2022 Dengue Virus Epidemic in Karachi, Pakistan, Through Genome Analyses | 2025-12-15 | JOURNAL OF INFECTIOUS DISEASES |
| 2 | Comparative analysis of sample loop and counting bead？based methods for size-dependent bias in flow cytometry | 2025-12-02 | Analytical Chemistry |
| 3 | Bioinformatics analysis of Rickettsia typhi autoimmune associations and screening of Streptomyces-derived inhibitors | 2025-11-28 | BioData Mining |
| 4 | Proteome mining of Yersinia enterocolitica for drug targets and computational inhibitor identification with ADMET, anti-inflammation potential and formulation characteristics | 2025-09-29 | BioData Mining |
| 5 | Exploring murE protein inhibitors of Tropheryma whipplei through pharmacoinformatic approaches incorporating solubility-enhancing formulation insights | 2025-08-14 | Frontiers in Pharmacology |
| 6 | Nanopore Sequencing Reveals the Genomic Diversity of the Variants of Concern of SARS-CoV-2 During 2021 Disease Outbreak in Pakistan | 2025-08-01 | SCIENTIFIC REPORTS |
| 7 | Prediction of novel high-risk variants through co-occurrence analysis of mutation hotspots | 2025-07-01 | HELIYON |
| 8 | Semi-automated diagnostic system and Severe fever with thrombocytopenia syndrome (SFTS) viral RNA reference materials encapsulated in virus-like particles for on-site diagnosis of SFTS | 2025-06-15 | SENSORS AND ACTUATORS B-CHEMICAL |
| 9 | Quantification of cellular uptake of gold nanoparticles via scattering intensity changes in flow cytometry | 2025-06-07 | Nanoscale Advances |
| 10 | Development of reference-based model for improved analysis of bacterial community | 2025-06-01 | FOOD RESEARCH INTERNATIONAL |
| 11 | Development of gene-in-plasmid DNA reference materials certified by single-molecule counting | 2025-05-02 | Analytical and Bioanalytical Chemistry |
| 12 | Clonorchis sinensis Excretory/Secretory Proteins ameliorate Inflammation in Rheumatoid Arthritis and Ankylosing Spondylitis | 2025-03-04 | PARASITE VECTOR |
| 13 | SARS-CoV-2 pseudovirus dysregulates hematopoiesis and induces inflammaging of hematopoietic stem and progenitor cells | 2025-03-03 | EXPERIMENTAL AND MOLECULAR MEDICINE |
| 14 | Development of RNA reference materials for norovirus GI and GII using digital PCR | 2025-02-01 | VIROLOGY |
| 15 | Hyperspectral analysis to assess gametocytogenesis stage progression in malaria-infected human erythrocytes | 2025-02-01 | Journal of Biomedical Optics |
| 16 | The BAF complex enhances transcription through interaction with H3K56ac in the histone globular domain | 2024-11-07 | Nature Communications |
| 17 | Suppression of a transcriptional regulator, HexA, is essential for triggering the bacterial virulence of the entomopathogen, Xenorhabdus hominickii | 2024-10-10 | JOURNAL OF INVERTEBRATE PATHOLOGY |
| 18 | Unraveling the Molecular Landscape of SCN1A Gene Knockout in Cerebral Organoids: A Multiomics Approach Utilizing Proteomics, Lipidomics, and Transcriptomics | 2024-09-13 | ACS Omega |
| 19 | Validation of one-step reverse transcription digital PCR assays for Norovirus GI | 2024-09-02 | Analytical Biochemistry |
| 20 | Use of a sample injection loop for an accurate measurement of particle number concentration by flow cytometry | 2024-06-27 | Analytical and Bioanalytical Chemistry |
| 21 | The secreted protein Amuc_1409 from Akkermansia muciniphila improves gut health through intestinal stem cell regulation | 2024-04-06 | Nature Communications |
| 22 | Particulate Matter Induces Oxidative Stress and Ferroptosis in Human Lung Epithelial Cells | 2024-02-19 | Toxics |
| 23 | Seasonal Variations of the Airborne Microbial Assemblages of the Seoul Subway, South Korea from 16S and ITS Gene Profiles with Chemical Analysis | 2022-12-01 | SCIENTIFIC REPORTS |
| 24 | Quantifying fluorescent nanoparticle uptake in mammalian cells using a plate reader | 2022-11-23 | SCIENTIFIC REPORTS |
| 25 | Uncovering the Fresh Snowfall Microbiome and its Chemical Characteristics with Backward Trajectories in Daejeon, Republic of Korea | 2022-09-28 | ATMOSPHERE |
| 26 | Rapid and sensitive amplicon-based genome sequencing of SARS-CoV-2 | 2022-08-17 | FRONTIERS IN MICROBIOLOGY |
| 27 | Modification of ER alpha by UFM1 Increases Its Stability and Transactivity for Breast Cancer Development | 2022-06-30 | Molecules and Cells |
| 28 | Design, Synthesis and Biological Evaluation of 1,3,5-Triazine Derivatives Targeting hA1 and hA3 Adenosine Receptor | 2022-06-22 | MOLECULES |
| 29 | TREX1 degrades the 3' end of the small DNA oligonucleotide products of nucleotide excision repair in human cells | 2022-04-22 | NUCLEIC ACIDS RESEARCH |
| 30 | Human Alphacoronavirus Universal Primers for Genome Amplification and Sequencing | 2022-03-25 | FRONTIERS IN MICROBIOLOGY |
| 31 | Development of SARS-CoV-2 packaged RNA reference material for nucleic acid testing | 2022-02-01 | Analytical & Bioanalytical Chemistry |
| 32 | Precise RNA quantification by counting individual RNA molecules using high-sensitivity capillary flow cytometry | 2022-01-25 | Analytical Chemistry |
| 33 | Probing TGF- β 1-induced cytoskeletal rearrangement by fluorescent-labeled silica nanoparticle uptake assay | 2021-12-01 | BIOCHEMISTRY AND BIOPHYSICS REPORTS |
| 34 | Comparison of 16S rRNA gene based microbial profiling using five next-generation sequencers and various primers | 2021-10-14 | FRONTIERS IN MICROBIOLOGY |
| 35 | Inhibition of UBA5 Expression and Induction of Autophagy in Breast Cancer Cells by Usenamine A | 2021-09-10 | Biomolecules |
| 36 | Discovery of Klf2 interactors in mouse embryonic stem cells by immunoprecipitation-mass spectrometry utilizing exogenously expressed bait | 2021-09-01 | BBA-PROTEINS PROTEOM |
| 37 | Anticancer Effects of Propionic Acid Inducing Cell Death in Cervical Cancer Cells | 2021-08-16 | MOLECULES |
| 38 | Nucleic Acid Testing of SARS-CoV-2 | 2021-06-07 | INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES |
| 39 | High Sensitivity microvolume UV absorption spectrometry for routine analysis of small-volume biological samples | 2021-05-06 | BIOTECHNIQUES |
| 40 | Comparison of digital PCR and quantitative PCR with various SARS-CoV-2 primer-probe sets | 2021-03-28 | JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY |
| 41 | 1-Methoxylespeflorin G11 Protects HT22 Cells from Glutamate-Induced Cell Death through Inhibition of ROS Production and Apoptosis | 2021-02-28 | JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY |
| 42 | A Half-Day Genome Sequencing Protocol for Middle East Respiratory Syndrome Coronavirus | 2021-02-19 | FRONTIERS IN MICROBIOLOGY |
| 43 | Quantitative proteomic profiling of Cervicovaginal fluid from pregnant women with term and preterm birth | 2021-02-15 | PROTEOME SCIENCE |
| 44 | SILAC-Based Quantitative Proteomic Analysis of Oxaliplatin-Resistant Pancreatic Cancer Cells | 2021-02-10 | CANCERS |
| 45 | Anticancer Activity of Lesbicoumestan in Jurkat Cells via Inhibition of Oxidative Stress-Mediated Apoptosis and MALT1 Protease | 2021-01-02 | MOLECULES |
| 46 | Secondary Metabolites Isolated From Streptomyces sp. MJM3055 and Their Cytotoxicity Against Jurkat Cells | 2020-12-04 | NAT PROD COMMUN |
| 47 | Quantification of single-strand DNA by sequence-specific counting in capillary flow cytometry | 2020-12-01 | METROLOGIA |
| 48 | Inhibition of Jurkat T Cell Proliferation by Active Components of Rumex japonicus Roots via Induced Mitochondrial Damage and Apoptosis Promotion | 2020-10-20 | JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY |
| 49 | Anti-Melanogenesis Activity of 6-O-Isobutyrylbritannilactone from Inula britannica on B16F10 Melanocytes and In Vivo Zebrafish Models | 2020-08-26 | MOLECULES |
| 50 | Quantifying the level of nanoparticle uptake in mammalian cells using flow cytometry | 2020-08-07 | NANOSCALE |
| 51 | Apoptosis in Leukemic Cells Induced by Anti-proliferative Coumarin Isolated from the Stem Bark of Fraxinus rhynchophylla | 2020-07-20 | JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY |
| 52 | Resource conservation using whole body autophagy: Self-digestion of shedded gut lining cells in the small intestine | 2020-06-30 | Korean Journal of Food Science and Technology |
| 53 | Evaluating Cell Death Using Cell-Free Supernatant of Probiotics in Three-Dimensional Spheroid Cultures of Colorectal Cancer Cells | 2020-06-13 | Journal of Visualized Experiments |
| 54 | WWC1 and NF2 Prevent the Development of Intrahepatic Cholangiocarcinoma by Regulating YAP/TAZ Activity through LATS in Mice | 2020-05-31 | Molecules and Cells |
| 55 | Improvement of Digital PCR Conditions for Direct Detection of KRAS Mutations | 2020-04-24 | J CLIN LAB ANAL |
| 56 | 2α-hydroxyeudesma-4,11(13)-dien-8β,12-olide isolated from inula britannica induces apoptosis in diffuse large b-cell lymphoma cells | 2020-02-18 | Biomolecules |
| 57 | Detection of the small oligonucleotide products of nucleotide excision repair in UVB-irradiated human skin | 2020-02-01 | DNA REPAIR |
| 58 | Novel invasion indices quantify the feed-forward facilitation of tumor invasion by macrophages | 2020-01-20 | SCIENTIFIC REPORTS |
| 59 | Active Turnover of Heme in Hibernation Period in Mammals | 2020-01-15 | Frontiers in Physiology |
| 60 | An Anti-proliferative ent-Kaurane Diterpene Isolated from the Roots of Mallotus japonicus Induced Apoptosis in Leukemic Cells | 2020-01-09 | NAT PROD COMMUN |
| 61 | Betulin Protects HT-22 Hippocampal Cells against ER Stress through Induction of Heme Oxygenase-1 and Inhibition of ROS Production | 2019-12-23 | NAT PROD COMMUN |
| 62 | iTRAQ-Based Quantitative Proteomic Comparison of 2D and 3D Adipocyte Cell Models Co-cultured with Macrophages Using Online 2D-nanoLC-ESI-MS/MS | 2019-12-01 | SCIENTIFIC REPORTS |
| 63 | Quantitative analysis of melanin content in a three-dimensional melanoma cell culture | 2019-12-01 | SCIENTIFIC REPORTS |
| 64 | Antiproliferative Pterocarpans and Coumestans from Lespedeza bicolor | 2019-11-22 | JOURNAL OF NATURAL PRODUCTS |
| 65 | Differential Mechanism of ATP Production Occurs in Response to Succinylacetone in Colon Cancer Cells | 2019-10-03 | MOLECULES |
| 66 | Characterization of the Anti-Cancer Activity of the Probiotic Bacterium Lactobacillus fermentum Using 2D vs. 3D Culture in Colorectal Cancer Cells | 2019-10-01 | Biomolecules |
| 67 | Platyphylloside Isolated from Betula platyphylla is Antiproliferative and Induces Apoptosis in Colon Cancer and Leukemic Cells. | 2019-08-15 | MOLECULES |
| 68 | Structures of three ependymin-related proteins suggest their function as a hydrophobic molecule binder. | 2019-07-01 | IUCrJ |
| 69 | Development of Triglyceride Certified Reference Materials in Human Frozen Serum Using Isotope Dilution-Liquid Chromatography-Tandem Mass Spectrometry | 2019-05-01 | BULLETIN OF THE KOREAN CHEMICAL SOCIETY |
| 70 | Effect of fibroblast co-culture on the proliferation, viability and drug response of colon cancer cells | 2019-02-01 | Oncology Letters |
| 71 | Quantitative Proteomic Analysis of 2D and 3D Cultured Colorectal Cancer Cells: Profiling of Tankyrase Inhibitor XAV939-Induced Proteome | 2018-12-01 | SCIENTIFIC REPORTS |
| 72 | Simultaneous detection of nucleotide excision repair events and apoptosis-induced DNA fragmentation in genotoxin-treated cells | 2018-12-01 | SCIENTIFIC REPORTS |
| 73 | Development of a parallel microbore hollow fiber enzyme reactor platform for online 18O-labeling: Application to lectin-specific lung cancer N-glycoproteome | 2018-11-15 | J CHROMATOGR B |
| 74 | ANKRD9 is associated with tumor suppression as a substrate receptor subunit of ubiquitin ligase | 2018-10-01 | BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE |
| 75 | Complete Genome of Bacillus subtilis subsp. subtilis KCTC 3135T and Variation in Cell Wall Genes of B. subtilis Strains | 2018-10-01 | JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY |
| 76 | Mass Spectrometry-Based Screening Platform Reveals Orco Interactome in Drosophila melanogaster | 2018-02-28 | Molecules and Cells |
| 77 | Transcriptomic analysis of mitochondrial TFAM depletion changing cell morphology and proliferation | 2017-12-19 | SCIENTIFIC REPORTS |
| 78 | Quantitative Analysis of Cell Proliferation by a Dye Dilution Assay: Application to Cell Lines and Cocultures | 2017-04-04 | Cytometry Part A |
| 79 | Detection of the Excised, Damage-containing Oligonucleotide Products of Nucleotide Excision Repair in Human Cells | 2017-01-01 | PHOTOCHEM PHOTOBIOL |
| 80 | International comparison of enumeration-based quantification of DNA copy-concentration using flow cytometric counting and digital polymerase chain reaction | 2016-12-20 | Analytical Chemistry |
| 81 | Preparation of soluble isotopically labeled human growth hormone produced in Escherichia coli | 2016-11-01 | J CHROMATOGR B |
| 82 | Recent advances in mass spectrometry-based proteomics of gastric cancer | 2016-10-07 | World Journal of Gastroenterology |
| 83 | Normalization of human RNA-seq experiments using chimpanzee RNA as a spike-in standard | 2016-08-25 | SCIENTIFIC REPORTS |
| 84 | Burkholderia jirisanensis sp. nov., isolated from forest soil | 2016-03-01 | INT J SYST EVOL MICR |
| 85 | Complete genome of Kangiella geojedonensis KCTC 23420T, putative evidence for recent genome reduction in marine environments | 2015-12-01 | MAR GENOM |
| 86 | An Integrated Approach for Analysis of the DNA Damage Response in Mammalian Cells: NUCLEOTIDE EXCISION REPAIR, DNA DAMAGE CHECKPOINT, AND APOPTOSIS. | 2015-11-27 | JOURNAL OF BIOLOGICAL CHEMISTRY |
| 87 | Reference Materials for Calibration of Analytical Biases in Quantification of DNA methylation | 2015-09-14 | PLOS ONE |
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